Automated microscopy for fission track dating — serving science since 1979
Fission Track Dating

Frequently Asked Questions

Four decades of questions from the FTD community, answered — from how automated counting really works to what to do about dust in your microscope.

Automated counting

What do we mean by "automatic"?

Since 1979 our equipment has automated complex, tedious processes — but it has never pretended to replace the expert. In FTD that journey ran from automatic sample positioning with manual "clicker" counting, through drawing tubes and digitiser tablets, to on-screen counting, and now to fully automatic capture and counting.

Our systems do not make the final scientific decisions: they do not decide what is or is not a fission track, or exactly where a track ends. What they do is eliminate the fatigue of repetitive work and present the expert with a small, high-quality candidate set instead of an enormous raw one. Every entity the system recognises is documented in a data table, and our latest software stores a complete three-dimensional image stack of each grain, so you can always return to the source data.

The automatic counting systems genuinely run without operator intervention during capture and counting. There is an initial set-up per sample and a final review-and-edit pass — for example, overlapping track clusters that even a human struggles to separate are estimated by the software but can always be overridden by the operator.

Two advantages deserve emphasis: automation counts densities well beyond what a human can conveniently manage, and — unlike a human, whose counts vary with fatigue, interest and eyesight — the machine is perfectly consistent under identical conditions. Results from a substantial number of installations have borne this out.

How does the automatic track counting module work?

Fission tracks in apatite are counted automatically by capturing both reflected- and transmitted-light images and using them to discriminate genuine tracks from non-track objects. The uranium content of the apatite is measured by laser-ablation ICP-MS, which avoids the time-consuming irradiation step of the external detector method.

If you prefer to continue with the external detector method, the same module automatically counts the induced tracks on the mica detector as well.

What is the structure of the automatic counting software?

The software is split into two packages — TrackWorks, which creates the data files and images at the microscope, and FastTracks, which lets the analysis be carried out anywhere in the world using those files. Within them, the process has three stages:

  1. Capture — images are captured and stored in a specialised, proprietary format.
  2. Automated counting — which can run offline on a different computer, taking the load off the microscope system, the bottleneck in every lab.
  3. Review — the operator inspects and re-categorises the small number of marginal objects. In our experience the number of false hits is very small; the error level is of the same order as careful manual counting.

The countable track density limit is roughly an order of magnitude higher than for manual counting, and review takes a fraction of the time of a manual count — with far greater consistency.

Can we use the auto-count system with the traditional EDM technique?

Yes, you can. One reason the new LA-ICP-MS workflow was developed is that it bypasses neutron irradiation — access to suitable reactors is becoming difficult in some countries. But we are equally aware that some laboratories have no convenient access to an LA-ICP-MS instrument.

The software therefore supports both techniques. In fact, automatically counting tracks on the mica detector — with its clean background — is considerably easier than on the apatite grain with its many artefacts.

How long does it take to process a typical sample?

Estimates supplied by workers in the discipline, for a typical sample of 20–30 grains:

  1. Preparing the mount — up to a few days; preparation for automated counting is critical (a procedure document by Prof. Gleadow is available on request).
  2. Aligning and labelling suitable grains — one to two hours, depending heavily on sample quality.
  3. Capturing images — about 2 minutes per grain; 1–2 hours in total.
  4. Automatic counting in FastTracks — 10–20 seconds per grain; about 15 minutes in total.
  5. Labelling regions of interest — quick.
  6. Correcting the automatic count — up to a few minutes per grain for poor-quality grains.

The automatic capture and counting steps are fast — it is the remaining manual steps that dominate. For comparison, counting a sample entirely by hand takes around three hours of intense, error-prone labour, and is simply impossible at the higher track densities the automated system handles comfortably.

Measurement & calibration

How is track length calibration performed?

Several calibration steps are needed, but each only once. The essential tool — supplied with every full Autoscan system — is a stage micrometer: a slide engraved with very accurately positioned fine lines.

The optical train must be calibrated for each objective/Optovar/camera/C-mount combination in use. The procedure, built into our software, involves placing the stage micrometer under the microscope and entering the number of microns visible across the screen horizontally and vertically. This creates a microns-per-pixel constant for that combination, so any distance clicked on screen converts immediately into real microns. It is carried out for each objective at installation.

Recalibration is only needed when an element changes — different objective models have slightly different magnifications, cameras different pixel sizes, C-mounts different lens factors. One caution: total magnifications beyond 1000× produce only "empty magnification". The Rayleigh resolution limit has already been reached; the image gets bigger and blurrier, adding no information — however much psychological comfort it may offer.

How are horizontal confined track lengths measured?

We have not yet developed a fully automated module for confined track lengths — that is our next objective, and a further research project with Prof. Gleadow's group is planned. Existing clients will be offered a software upgrade path once it is achieved.

In the meantime, our systems measure track lengths semi-automatically: the high-resolution camera presents a high-quality image on screen, and the operator clicks each end of the track. The measurements are highly accurate; they simply still involve a human.

Background & practical matters

For non-specialists: why is FTD used in oil exploration?

Oil occurs where suitable prehistoric organic matter was buried in rock that then experienced the right thermal history to turn that matter into oil. Assessing a prospect therefore requires knowing the age of the rock and its temperature history — and fission track dating provides both, using marker minerals such as apatite, zircon and sphene that contain traces of natural uranium.

As uranium atoms fission over geological time, they leave microscopic damage tracks in the crystal. Counting the accumulated tracks reveals age (in the external detector method, by comparison with tracks induced in a mica detector at a research reactor — in Australia, ANSTO's OPAL facility). Because heat "anneals" and shortens tracks, the statistical distribution of track lengths reveals the time-temperature history.

The observational challenge is severe: tracks are under 16 µm long and about 1 µm across — close to the resolution limit of visible light — and at the 1000× magnification required, the whole track is never in focus at once. That is why high-quality 3-D imaging is essential to the analysis.

With offshore drilling costing on the order of a million US dollars a day, telling someone to drill in the wrong place does nothing for one's popularity. Core samples are still taken — the analysis is simply of far higher quality.

HELP! Dust in my microscope!

It happens in the best of families. After the panic subsides, the task is to work out where the dust is. These notes refer to our typical Zeiss-based systems, but apply broadly.

Start with the camera — the easiest check. Rotate the camera: if the spots stay put, the dust is on the camera chip. Remove the camera and very carefully blow the dust off. Never rub the fragile sensor, and avoid paper tissues — they contain clay, are abrasive, and drop lint. Use a proper lens cloth, a blower brush (never touch the bristles — skin oils transfer to everything you clean) or canned air. For solvents, isopropyl alcohol is best as it leaves no residue; pre-impregnated wipes are excellent. Avoid harsh solvents such as turpentine or petroleum — in severe cases they attack lens cements and plastic finishes.

If the spots move when the camera rotates, work your way down the optical path:

  1. The beam-splitting prism under the camera. Check by eye down the open tube — and cap the opening immediately afterwards; an open tube collects dust fast.
  2. The eyepieces. Remove one at a time and look up at the light against a plain background.
  3. The mirror cube (reflector turret above the objectives) — the likely culprit if dust appears only in reflected light.
  4. The LED, diaphragms and neutral-density filters — though these sit far out of focus and must be large to show. Both light paths' sliders pull out for cleaning.
  5. The objectives. Dust on an objective shows only with that objective — change objectives and see if the spot survives.
  6. The condenser (transmitted light only). Its top surface, and the swing-out lens beneath it, are two enthusiastic dust collectors; at worst, pull the condenser out to clean it.
  7. The lens at the base of the stand under the condenser (again transmitted light only) — often a bad offender, which is why Zeiss supplies dust covers. Use them.
Question not answered here? Email Email us — after 45 years in this field, we have probably heard it before.